Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH22415.1PFAM: Phosphoribosyltransferase; KEGG: cdl:CDR20291_0132 putative phosphoribosyl transferase. (237 aa)    
Predicted Functional Partners:
AEH23090.1
DNA protecting protein DprA; KEGG: tte:TTE1450 DNA uptake Rossmann fold nucleotide-binding protein; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A.
 
 
 0.894
AEH23620.1
KEGG: sep:SE1274 ComEC late competence protein 3; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
 
  
 0.881
AEH22414.1
rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
     
 0.833
AEH22417.1
Acylphosphatase; KEGG: sfu:Sfum_1427 acylphosphatase; HAMAP: Acylphosphatase; PFAM: Acylphosphatase-like.
       0.800
AEH22416.1
Peptidase T-like protein; KEGG: dat:HRM2_27370 PepT; TIGRFAM: Peptidase M20B, peptidase T; PFAM: Peptidase M20, dimerisation; Peptidase M20.
       0.784
AEH22979.1
Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: tmt:Tmath_1299 Mg chelatase, subunit ChlI; SMART: ATPase, AAA+ type, core.
 
  
 0.771
AEH22717.1
PFAM: Prephenate dehydrogenase; KEGG: mmx:MmarC6_1158 prephenate dehydrogenase.
   
    0.652
AEH22577.1
KEGG: dak:DaAHT2_1957 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like; Belongs to the UPF0758 family.
 
    0.644
AEH23078.1
UPF0102 protein yraN; KEGG: dtu:Dtur_1530 hypothetical protein; HAMAP: Uncharacterised protein family UPF0102; PFAM: Uncharacterised protein family UPF0102; Belongs to the UPF0102 family.
 
    0.625
xerC
Tyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.602
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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