Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEH22423.1KEGG: dte:Dester_1082 hypothetical protein. (470 aa)    
Predicted Functional Partners:
AEH22560.1
KEGG: dte:Dester_0979 hypothetical protein.
  
     0.773
AEH23554.1
Hypothetical protein.
  
     0.746
AEH22618.1
PFAM: ATP-grasp fold, RimK-type; KEGG: dol:Dole_1115 RimK domain-containing protein ATP-grasp.
  
     0.736
AEH23609.1
KEGG: sfu:Sfum_3774 membrane protein-like.
  
     0.693
AEH22971.1
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: apo:Arcpr_0800 molybdenum ABC transporter, periplasmic molybdate-binding protein.
  
     0.680
AEH22134.1
PFAM: Permease YjgP/YjgQ, predicted; KEGG: nis:NIS_0386 hypothetical protein.
  
    0.598
AEH23055.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: dal:Dalk_2850 hypothetical protein.
  
     0.595
AEH22184.1
Hypothetical protein; KEGG: pmx:PERMA_0605 putative peptidase M1, membrane alanine aminopeptidase.
  
     0.588
AEH23700.1
KEGG: hth:HTH_0612 hypothetical protein.
  
     0.576
AEH22947.1
Hypothetical protein; KEGG: sat:SYN_01357 putative cytoplasmic protein.
  
     0.561
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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