STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22458.1PFAM: Uncharacterised protein family UPF0150; KEGG: mem:Memar_1097 hypothetical protein. (85 aa)    
Predicted Functional Partners:
AEH22459.1
YcfA family protein; PFAM: YcfA-like; KEGG: cyn:Cyan7425_1350 YcfA family protein.
 
 
 
 0.996
AEH22460.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
       0.714
AEH22461.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: dte:Dester_1373 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
       0.714
AEH22462.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
       0.714
AEH22457.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
       0.436
AEH22453.1
PFAM: Glycosyl transferase, family 2; KEGG: cni:Calni_1175 glycosyl transferase family 2.
       0.412
AEH22454.1
Hypothetical protein; KEGG: gtn:GTNG_3257 polymerase.
       0.412
AEH22455.1
PFAM: Glycosyl transferase, group 1; KEGG: gur:Gura_3183 glycosyl transferase, group 1.
       0.412
AEH22456.1
PFAM: Glycosyl transferase, group 1; KEGG: tal:Thal_0135 glycosyl transferase group 1.
       0.412
AEH23176.1
PFAM: Nucleotidyltransferase; KEGG: tmt:Tmath_0293 DNA polymerase beta domain protein region.
  
     0.405
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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