Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH22509.1Hypothetical protein; KEGG: dbr:Deba_2428 tol-pal system protein YbgF. (301 aa)    
Predicted Functional Partners:
AEH22507.1
Deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; KEGG: ddf:DEFDS_0159 deoxyguanosinetriphosphate triphosphohydrolase; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Belongs to the dGTPase family. Type 2 subfamily.
       0.787
AEH22508.1
KEGG: adg:Adeg_0900 formyl transferase domain protein.
       0.780
AEH22506.1
KEGG: sat:SYN_02529 single-stranded DNA-specific exonuclease; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1.
       0.778
AEH23641.1
Hypothetical protein; KEGG: dpr:Despr_2185 TolB domain-containing protein.
 
  
 0.766
pal
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tye:THEYE_A2098 peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family.
 
  
 0.669
AEH22236.1
TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: dak:DaAHT2_1639 outer membrane assembly lipoprotein YfiO.
 
   
 0.589
AEH22516.1
PFAM: Outer membrane chaperone Skp (OmpH); KEGG: tye:THEYE_A0093 outer membrane protein, putative.
  
  
 0.585
AEH23358.1
Hypothetical protein; KEGG: ddf:DEFDS_1056 peptidyl-prolyl cis-trans isomerse D.
  
   0.564
AEH22505.1
TIGRFAM: UDP-glucose 4-epimerase; KEGG: aae:aq_1069 UDP-glucose-4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.561
fhs
HAMAP: Formate-tetrahydrofolate ligase, FTHFS; KEGG: dak:DaAHT2_0837 formate--tetrahydrofolate ligase; PFAM: Formate-tetrahydrofolate ligase, FTHFS; Belongs to the formate--tetrahydrofolate ligase family.
       0.560
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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