Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH22516.1PFAM: Outer membrane chaperone Skp (OmpH); KEGG: tye:THEYE_A0093 outer membrane protein, putative. (184 aa)    
Predicted Functional Partners:
pal
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tye:THEYE_A2098 peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family.
 
 
 0.959
AEH23651.1
KEGG: dpr:Despr_0576 outer membrane protein assembly complex, YaeT protein; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number.
 
  
 0.888
AEH22515.1
Glucokinase; KEGG: plu:plu1405 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.
       0.815
AEH22518.1
KEGG: sfu:Sfum_1128 hypothetical protein.
       0.735
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
  
    0.669
AEH22509.1
Hypothetical protein; KEGG: dbr:Deba_2428 tol-pal system protein YbgF.
  
  
 0.585
AEH23473.1
PFAM: OstA-like protein; KEGG: sul:SYO3AOP1_0206 lipopolysaccharide transport periplasmic protein LptA.
  
    0.577
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
    0.572
rpmJ
TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: tam:Theam_0281 ribosomal protein L36; PFAM: Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
   
    0.564
rpsM
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
    0.564
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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