STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22522.1Acylphosphatase; TIGRFAM: Hydrogenase maturation factor, HypF-type; HAMAP: Acylphosphatase; KEGG: tte:TTE0131 hydrogenase maturation factor; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type. (756 aa)    
Predicted Functional Partners:
AEH22567.1
KEGG: hth:HTH_1006 hydrogenase expression/formation protein; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein.
 
 
 0.978
AEH22981.1
KEGG: hth:HTH_1813 hydrogenase assembly chaperone; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC.
 
 
 0.877
AEH22982.1
KEGG: hth:HTH_1814 hydrogenase expression/formation protein; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein.
 
  
 0.876
AEH22523.1
PFAM: Metallophosphoesterase; KEGG: hth:HTH_1454 metallophosphoesterase.
       0.773
AEH22524.1
Ureidoglycolate lyase; KEGG: hor:Hore_20970 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like.
       0.773
AEH22525.1
KEGG: dal:Dalk_3856 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
       0.773
hypA
Hydrogenase expression/synthesis HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.620
AEH22566.1
KEGG: saf:SULAZ_0746 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like.
 
   
 0.588
AEH22521.1
KEGG: drt:Dret_1504 hypothetical protein.
       0.574
AEH22569.1
Hydrogenase expression/formation protein; KEGG: aae:aq_667 HupD hydrogenase related function; TIGRFAM: Peptidase A31, hydrogenase expression/formation protein; Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein.
 
   
 0.502
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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