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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22542.1PFAM: Secretion protein HlyD; KEGG: tye:THEYE_A1628 HlyD family secretion protein, putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (321 aa)    
Predicted Functional Partners:
AEH22544.1
PFAM: ABC-2 type transporter; KEGG: tye:THEYE_A1624 ATPase component ABC-type multidrug transport system.
 
  
 0.947
AEH22545.1
PFAM: ABC-2 type transporter; KEGG: tye:THEYE_A1623 ABC-2 type transporter.
 
  
 0.947
AEH22543.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: tye:THEYE_A1627 ABC transporter ATP-binding component; SMART: ATPase, AAA+ type, core.
 
    0.946
AEH22343.1
KEGG: sku:Sulku_2653 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein.
 
 
 0.796
AEH23162.1
PFAM: Outer membrane efflux protein; KEGG: tye:THEYE_A0119 outer membrane efflux protein.
 
 
 0.779
rlmH
Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.773
AEH22541.1
PFAM: Histone deacetylase superfamily; KEGG: sat:SYN_00740 histone deacetylase family protein.
       0.773
AEH22539.1
PFAM: Organic solvent tolerance protein; KEGG: dps:DP3010 organic solvent tolerance protein (OstA).
       0.768
AEH22546.1
PFAM: Protein of unknown function DUF369; KEGG: tye:THEYE_A0257 hypothetical protein.
       0.757
AEH23159.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: vpr:Vpar_1070 protein of unknown function DUF214.
 
  
 0.721
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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