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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22549.1PFAM: Peptidase M48, Ste24p; KEGG: dol:Dole_1630 peptidase M48 Ste24p. (474 aa)    
Predicted Functional Partners:
AEH22550.1
KEGG: dpr:Despr_2621 hypothetical protein.
       0.701
AEH22551.1
PFAM: ATP-grasp fold, RimK-type; KEGG: dak:DaAHT2_2417 RimK domain protein ATP-grasp.
 
     0.701
AEH22539.1
PFAM: Organic solvent tolerance protein; KEGG: dps:DP3010 organic solvent tolerance protein (OstA).
 
    0.570
AEH22234.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: tye:THEYE_A0959 TolQ protein.
  
    0.441
AEH22548.1
PFAM: Phosphoglycerate mutase; KEGG: clj:CLJU_c35540 alpha-ribazole phosphatase.
       0.412
AEH22547.1
KEGG: afu:AF2264 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
       0.407
AEH23162.1
PFAM: Outer membrane efflux protein; KEGG: tye:THEYE_A0119 outer membrane efflux protein.
  
     0.403
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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