STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22586.1TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; Trehalose-phosphatase; KEGG: hth:HTH_0762 trehalose-6-phosphate synthase; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase. (729 aa)    
Predicted Functional Partners:
AEH22584.1
PFAM: Glycosyl transferase, group 1; KEGG: hth:HTH_0760 glycosyltransferase.
 0.995
AEH23588.1
KEGG: ttm:Tthe_2060 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.
    
 0.951
AEH23476.1
Hypothetical protein; KEGG: tye:THEYE_A1962 Uma3.
   
    0.945
AEH22585.1
KEGG: hth:HTH_0761 hypothetical protein.
 
 
 0.904
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
  
 0.809
AEH22762.1
UDP-glucuronate 5'-epimerase; KEGG: pmx:PERMA_0403 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase.
     
 0.801
AEH23471.1
KEGG: tbo:Thebr_0751 RNA polymerase sigma-54 factor, RpoN; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54.
   
    0.760
AEH23481.1
1-deoxy-D-xylulose-5-phosphate synthase; KEGG: sfu:Sfum_1302 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal.
   
  
 0.717
AEH23118.1
KEGG: dat:HRM2_24820 OsmY; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria.
   
  
 0.709
AEH22427.1
PFAM: NADPH-dependent FMN reductase; KEGG: sfu:Sfum_1392 NADPH-dependent FMN reductase.
   
    0.677
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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