Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEH22607.1KEGG: tye:THEYE_A1135 hypothetical protein. (997 aa)    
Predicted Functional Partners:
AEH22297.1
PFAM: DNA helicase, UvrD/REP type; KEGG: rsd:TGRD_136 RecB-like exodeoxyribonuclease V beta chain.
 
     0.802
AEH22606.1
Hypothetical protein.
       0.779
AEH22608.1
TIGRFAM: FO synthase, subunit 2; PFAM: Radical SAM; KEGG: tam:Theam_0970 radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.777
AEH22609.1
PFAM: Glycosyl transferase, family 2; KEGG: app:CAP2UW1_3097 family 2 glycosyl transferase.
       0.755
AEH22610.1
Hypothetical protein; KEGG: pca:Pcar_1265 putative LPS biosynthesis enzyme.
       0.751
AEH22611.1
KEGG: pvi:Cvib_0642 hypothetical protein.
       0.751
AEH23128.1
PFAM: Oligosaccharyl transferase, STT3 subunit; KEGG: dte:Dester_1378 oligosaccharyl transferase STT3 subunit.
  
     0.696
AEH23387.1
KEGG: pca:Pcar_3121 hypothetical protein.
  
     0.678
AEH23609.1
KEGG: sfu:Sfum_3774 membrane protein-like.
  
     0.669
AEH22822.1
PFAM: Colicin V production protein; KEGG: chl:Chy400_1054 colicin V production protein.
  
     0.649
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.