STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22637.1KEGG: dps:DP2496 hypothetical protein. (252 aa)    
Predicted Functional Partners:
AEH22638.1
PFAM: Flavodoxin/nitric oxide synthase; KEGG: sfu:Sfum_3253 flavodoxin/nitric oxide synthase.
       0.815
AEH23486.1
PFAM: Dissimilatory sulphite reductase D; KEGG: dat:HRM2_42380 DsrD.
  
     0.772
AEH23593.1
YcaO-domain protein; TIGRFAM: YcaO-like; PFAM: YcaO-like; Tetratricopeptide TPR-1; KEGG: dol:Dole_1241 hypothetical protein; SMART: Tetratricopeptide repeat.
  
 
   0.771
AEH22639.1
KEGG: sat:SYN_00675 putative cytoplasmic protein.
       0.719
AEH23355.1
KEGG: dak:DaAHT2_0462 hypothetical protein.
  
     0.709
AEH22534.1
PFAM: Phosphoesterase, RecJ-like; KEGG: dak:DaAHT2_1369 phosphoesterase RecJ domain protein.
  
     0.698
AEH22640.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pmo:Pmob_1630 rubredoxin-type Fe(Cys)4 protein.
       0.672
AEH23115.1
TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: sfu:Sfum_4103 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD region.
  
    0.663
AEH22288.1
Heterodisulfide reductase subunit C; KEGG: tye:THEYE_A1829 QmoC.
  
     0.651
prfB
Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.646
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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