Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH22640.1PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pmo:Pmob_1630 rubredoxin-type Fe(Cys)4 protein. (53 aa)    
Predicted Functional Partners:
AEH22643.1
Desulfoferrodoxin; KEGG: dma:DMR_17610 desulfoferrodoxin; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding region; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx.
  
  
 0.764
AEH22639.1
KEGG: sat:SYN_00675 putative cytoplasmic protein.
       0.727
AEH22641.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tna:CTN_1927 rubredoxin-type Fe(Cys)4 protein.
 
    
0.714
AEH22638.1
PFAM: Flavodoxin/nitric oxide synthase; KEGG: sfu:Sfum_3253 flavodoxin/nitric oxide synthase.
  
  
 0.711
AEH22637.1
KEGG: dps:DP2496 hypothetical protein.
       0.672
AEH22642.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tye:THEYE_A1651 rubredoxin.
 
    
0.579
AEH22634.1
Riboflavin biosynthesis protein RibF; TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: toc:Toce_1233 riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase.
       0.569
carA
TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: dak:DaAHT2_0900 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; Belongs to the CarA family.
       0.559
prfB
Hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.559
AEH22483.1
CoA-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dps:DP2890 NADH oxidase; SMART: Rhodanese-like.
  
  
 0.450
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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