STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22642.1PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tye:THEYE_A1651 rubredoxin. (53 aa)    
Predicted Functional Partners:
AEH22643.1
Desulfoferrodoxin; KEGG: dma:DMR_17610 desulfoferrodoxin; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding region; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx.
  
  
 0.865
AEH22641.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tna:CTN_1927 rubredoxin-type Fe(Cys)4 protein.
 
    
0.635
AEH22640.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pmo:Pmob_1630 rubredoxin-type Fe(Cys)4 protein.
 
    
0.580
AEH22638.1
PFAM: Flavodoxin/nitric oxide synthase; KEGG: sfu:Sfum_3253 flavodoxin/nitric oxide synthase.
  
  
 0.563
AEH22639.1
KEGG: sat:SYN_00675 putative cytoplasmic protein.
       0.537
pheT
TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: chy:CHY_1570 phenylalanyl-tRNA synthetase subunit beta.
       0.525
AEH22645.1
Histone family protein DNA-binding protein; KEGG: ank:AnaeK_1909 integration host factor subunit alpha; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein.
  
    0.511
AEH22644.1
Regulatory protein MerR; SMART: HTH transcriptional regulator, MerR; KEGG: gpb:HDN1F_10630 transcriptional regulator, MerR family.
       0.509
AEH22637.1
KEGG: dps:DP2496 hypothetical protein.
       0.500
pheS
TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; KEGG: dte:Dester_0632 phenylalanyl-tRNA synthetase alpha chain; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
       0.493
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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