STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22657.1KEGG: deb:DehaBAV1_1373 beta-lactamase domain-containing protein. (250 aa)    
Predicted Functional Partners:
AEH22658.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
       0.530
AEH22659.1
KEGG: atm:ANT_26280 hypothetical protein.
       0.507
AEH23072.1
Y414 protein; KEGG: aae:aq_1106 hypothetical protein; TIGRFAM: Y414; PFAM: ATP dependent DNA ligase, central.
  
     0.479
AEH23511.1
UPF0278 protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.
  
   
 0.460
AEH23046.1
KEGG: aae:aq_324 hypothetical protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease.
  
     0.445
AEH22661.1
PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: tye:THEYE_A0931 protein TldD.
 
     0.442
AEH23423.1
KEGG: mel:Metbo_1273 hypothetical protein.
  
     0.417
AEH22508.1
KEGG: adg:Adeg_0900 formyl transferase domain protein.
  
    0.411
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.