STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22734.1KEGG: sat:SYN_00762 hypothetical protein. (219 aa)    
Predicted Functional Partners:
AEH22732.1
PFAM: Ribonuclease II/R; KEGG: dak:DaAHT2_0510 exoribonuclease II.
 
     0.831
hisA
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: clj:CLJU_c11710 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase.
       0.807
AEH22134.1
PFAM: Permease YjgP/YjgQ, predicted; KEGG: nis:NIS_0386 hypothetical protein.
  
     0.755
AEH22551.1
PFAM: ATP-grasp fold, RimK-type; KEGG: dak:DaAHT2_2417 RimK domain protein ATP-grasp.
  
     0.716
AEH22347.1
KEGG: dak:DaAHT2_2214 hypothetical protein.
  
     0.711
AEH23512.1
KEGG: dbr:Deba_1413 hypothetical protein.
  
     0.680
AEH22947.1
Hypothetical protein; KEGG: sat:SYN_01357 putative cytoplasmic protein.
  
     0.663
AEH23435.1
KEGG: dpr:Despr_0597 hypothetical protein.
  
     0.648
AEH22559.1
KEGG: dpr:Despr_1071 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
  
     0.644
AEH23137.1
PFAM: DNA polymerase III, delta; KEGG: ssp:SSP1171 DNA polymerase III subunit delta.
  
     0.639
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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