Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
AEH22747.1Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (434 aa)    
Predicted Functional Partners:
AEH22547.1
KEGG: afu:AF2264 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
 
 
 0.969
AEH22746.1
PFAM: Amino acid-binding ACT; KEGG: tye:THEYE_A0783 ACT domain protein.
 
   0.858
AEH22748.1
PFAM: Amino acid-binding ACT; KEGG: tye:THEYE_A0781 acetolactate synthase small subunit.
 
   0.822
AEH22750.1
KEGG: tye:THEYE_A0779 indolepyruvate oxidoreductase subunit IorB; PFAM: Pyruvate/ketoisovalerate oxidoreductase.
 
    0.739
AEH22749.1
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
    
0.698
AEH22751.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
       0.475
AEH23555.1
PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; KEGG: tye:THEYE_A1763 P-protein.
     
 0.469
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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