STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22752.1KEGG: dal:Dalk_1639 regulatory protein, FmdB family; TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative. (82 aa)    
Predicted Functional Partners:
AEH22595.1
Regulatory protein, FmdB family; KEGG: ddf:DEFDS_1168 hypothetical protein; TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative.
  
     0.735
AEH22618.1
PFAM: ATP-grasp fold, RimK-type; KEGG: dol:Dole_1115 RimK domain-containing protein ATP-grasp.
  
     0.668
AEH23554.1
Hypothetical protein.
  
     0.667
AEH22947.1
Hypothetical protein; KEGG: sat:SYN_01357 putative cytoplasmic protein.
  
     0.620
AEH23486.1
PFAM: Dissimilatory sulphite reductase D; KEGG: dat:HRM2_42380 DsrD.
  
     0.591
AEH23079.1
KEGG: sfu:Sfum_0165 hypothetical protein.
  
     0.554
AEH22751.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
       0.548
AEH23055.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: dal:Dalk_2850 hypothetical protein.
  
     0.540
AEH23140.1
KEGG: dol:Dole_2498 hypothetical protein.
  
     0.528
AEH23396.1
KEGG: dal:Dalk_5194 hypothetical protein.
  
     0.480
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.