STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22782.1KEGG: dsa:Desal_2479 protein TolA. (217 aa)    
Predicted Functional Partners:
AEH22781.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dpr:Despr_2187 cell division and transport-associated protein TolR.
  
 
 0.925
AEH22829.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: alv:Alvin_1672 TonB-dependent receptor.
  
 
 0.869
AEH22950.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hth:HTH_1677 biopolymer transport protein.
  
 
 0.828
AEH22783.1
KEGG: mgm:Mmc1_0698 L-aspartate aminotransferase; PFAM: Aminotransferase, class I/II.
       0.757
AEH22234.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: tye:THEYE_A0959 TolQ protein.
  
 
 0.719
AEH22949.1
tonB-system energizer ExbB; KEGG: hth:HTH_1678 biopolymer transport protein; TIGRFAM: TonB-system energizer ExbB type-2; PFAM: MotA/TolQ/ExbB proton channel.
  
 
 0.719
AEH22923.1
PFAM: BioY protein; TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: cts:Ctha_0981 TonB-dependent receptor.
   
 
 0.666
AEH22495.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: glo:Glov_3556 TonB-dependent receptor plug.
   
 
 0.636
AEH22908.1
KEGG: sul:SYO3AOP1_1421 hypothetical protein.
  
 
 0.569
AEH22914.1
KEGG: sul:SYO3AOP1_1421 hypothetical protein.
  
 
 0.569
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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