Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH22782.1KEGG: dsa:Desal_2479 protein TolA. (217 aa)    
Predicted Functional Partners:
AEH22781.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dpr:Despr_2187 cell division and transport-associated protein TolR.
  
 
 0.886
AEH22829.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: alv:Alvin_1672 TonB-dependent receptor.
  
 
 0.824
AEH22783.1
KEGG: mgm:Mmc1_0698 L-aspartate aminotransferase; PFAM: Aminotransferase, class I/II.
       0.757
AEH22950.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hth:HTH_1677 biopolymer transport protein.
  
 
 0.751
AEH22908.1
KEGG: sul:SYO3AOP1_1421 hypothetical protein.
  
 
 0.566
AEH22914.1
KEGG: sul:SYO3AOP1_1421 hypothetical protein.
  
 
 0.566
AEH22234.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: tye:THEYE_A0959 TolQ protein.
  
 
 0.561
AEH22949.1
tonB-system energizer ExbB; KEGG: hth:HTH_1678 biopolymer transport protein; TIGRFAM: TonB-system energizer ExbB type-2; PFAM: MotA/TolQ/ExbB proton channel.
  
 
 0.561
fbp
Protein of unknown function DUF100; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).
       0.542
AEH22780.1
Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: dat:HRM2_42430 hypothetical protein.
       0.535
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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