STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22832.1KEGG: oan:Oant_4175 hypothetical protein. (237 aa)    
Predicted Functional Partners:
AEH22300.1
PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: tye:THEYE_A1919 hypothetical protein.
  
  
  0.924
AEH23395.1
PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dte:Dester_1050 nickel transport complex protein, NikM subunit, transmembrane.
  
  
  0.919
AEH22833.1
KEGG: ppd:Ppro_1247 hypothetical protein.
 
     0.918
AEH23391.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: tye:THEYE_A1923 cobalt import ATP-binding protein CbiO; SMART: ATPase, AAA+ type, core.
 
  
 0.837
AEH23392.1
KEGG: tye:THEYE_A1922 cobalt ABC transporter, permease protein CbiQ; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit; PFAM: Cobalt transport protein.
 
  
 0.836
AEH23394.1
PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: tye:THEYE_A1920 CbiM.
 
  
  0.829
AEH22829.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: alv:Alvin_1672 TonB-dependent receptor.
 
    0.765
AEH22830.1
PFAM: Tetrapyrrole methylase; KEGG: ppd:Ppro_1250 uroporphyrin-III C/tetrapyrrole methyltransferase.
       0.752
AEH22831.1
PFAM: Amino acid permease-associated region; KEGG: ppd:Ppro_1252 amino acid permease-associated region.
       0.752
AEH23700.1
KEGG: hth:HTH_0612 hypothetical protein.
  
     0.647
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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