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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22833.1KEGG: ppd:Ppro_1247 hypothetical protein. (149 aa)    
Predicted Functional Partners:
AEH22300.1
PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: tye:THEYE_A1919 hypothetical protein.
 
  
  0.926
AEH23395.1
PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dte:Dester_1050 nickel transport complex protein, NikM subunit, transmembrane.
 
  
  0.923
AEH23393.1
KEGG: tye:THEYE_A1921 hypothetical protein.
 
  
  0.922
AEH22832.1
KEGG: oan:Oant_4175 hypothetical protein.
 
     0.918
AEH22830.1
PFAM: Tetrapyrrole methylase; KEGG: ppd:Ppro_1250 uroporphyrin-III C/tetrapyrrole methyltransferase.
 
     0.726
AEH22831.1
PFAM: Amino acid permease-associated region; KEGG: ppd:Ppro_1252 amino acid permease-associated region.
 
     0.719
AEH22829.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: alv:Alvin_1672 TonB-dependent receptor.
  
    0.652
AEH23700.1
KEGG: hth:HTH_0612 hypothetical protein.
  
     0.498
AEH22822.1
PFAM: Colicin V production protein; KEGG: chl:Chy400_1054 colicin V production protein.
 
     0.425
AEH23394.1
PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: tye:THEYE_A1920 CbiM.
 
     0.424
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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