Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH22901.1Peptidase M48 Ste24p; KEGG: aae:aq_972 hypothetical protein; PFAM: Peptidase M48, Ste24p; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; RNA-processing protein, HAT helix. (422 aa)    
Predicted Functional Partners:
AEH22900.1
PFAM: Protein of unknown function DUF81; KEGG: tye:THEYE_A0940 hypothetical protein.
       0.778
AEH23532.1
KEGG: hth:HTH_1464 integral membrane protein.
  
     0.568
AEH22902.1
Phosphohistidine phosphatase, SixA; KEGG: afu:AF1002 hypothetical protein; TIGRFAM: Phosphohistidine phosphatase SixA, subgroup; PFAM: Phosphoglycerate mutase.
       0.556
AEH22784.1
PFAM: Rickettsia 17kDa surface antigen; KEGG: tal:Thal_0566 17 kDa surface antigen.
  
     0.532
AEH23162.1
PFAM: Outer membrane efflux protein; KEGG: tye:THEYE_A0119 outer membrane efflux protein.
  
     0.490
AEH22364.1
Hypothetical protein; KEGG: sat:SYN_00931 integrin-like repeat-containing protein.
 
 
 
 0.464
AEH23424.1
KEGG: tye:THEYE_A1972 hypothetical protein.
  
     0.426
AEH23095.1
PFAM: Glycosyl transferase, family 9; KEGG: hth:HTH_1721 glycosyltransferase.
  
     0.406
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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