STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22909.1KEGG: sul:SYO3AOP1_1420 hypothetical protein. (104 aa)    
Predicted Functional Partners:
AEH22908.1
KEGG: sul:SYO3AOP1_1421 hypothetical protein.
       0.773
AEH22907.1
KEGG: sul:SYO3AOP1_1424 hypothetical protein.
       0.718
AEH22910.1
KEGG: sul:SYO3AOP1_1419 hypothetical protein.
       0.678
AEH22906.1
KEGG: sul:SYO3AOP1_1425 hypothetical protein.
       0.534
AEH22905.1
KEGG: sul:SYO3AOP1_1426 hypothetical protein.
       0.530
AEH22903.1
KEGG: sul:SYO3AOP1_1428 hypothetical protein.
       0.461
AEH22904.1
KEGG: sul:SYO3AOP1_1427 hypothetical protein.
       0.461
AEH22911.1
KEGG: sul:SYO3AOP1_1418 hypothetical protein.
       0.434
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.