Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEH22913.1KEGG: tye:THEYE_A1914 hypothetical protein. (240 aa)    
Predicted Functional Partners:
AEH22912.1
KEGG: sul:SYO3AOP1_1417 proteinase inhibitor I4 serpin; PFAM: Protease inhibitor I4, serpin; SMART: Protease inhibitor I4, serpin; Belongs to the serpin family.
       0.469
AEH22911.1
KEGG: sul:SYO3AOP1_1418 hypothetical protein.
       0.407
AEH22914.1
KEGG: sul:SYO3AOP1_1421 hypothetical protein.
       0.402
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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