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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22930.1Hypothetical protein. (164 aa)    
Predicted Functional Partners:
AEH22928.1
PFAM: Radical SAM; KEGG: tye:THEYE_A0358 radical SAM domain protein.
       0.816
xerC
Tyrosine recombinase xerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.813
AEH22927.1
Protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: Cysteine-rich region, CCG; KEGG: tye:THEYE_A0169 anaerobic glycerol-3-phosphate dehydrogenase, subunit C, putative.
       0.811
AEH22932.1
PFAM: Polynucleotide adenylyltransferase region; KEGG: dtu:Dtur_1497 CBS domain containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.806
AEH22926.1
KEGG: drt:Dret_2009 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region.
       0.800
AEH22924.1
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
       0.783
AEH22925.1
Agmatinase; TIGRFAM: Putative agmatinase; KEGG: dth:DICTH_1308 agmatinase, putative; PFAM: Ureohydrolase; Belongs to the arginase family.
       0.783
AEH22929.1
PFAM: Metallophosphoesterase; KEGG: dol:Dole_0345 metallophosphoesterase.
       0.774
AEH22935.1
KEGG: ddf:DEFDS_1930 phosphatase Ppx/GppA family; PFAM: Ppx/GppA phosphatase; Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein.
       0.655
AEH22933.1
PFAM: Ribosomal protein S1, RNA binding domain; KEGG: tth:TTC1824 30S ribosomal protein S1.
       0.633
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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