Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEH22952.1PFAM: Protein of unknown function, CGGC domain; KEGG: tye:THEYE_A1863 hypothetical protein. (125 aa)    
Predicted Functional Partners:
AEH23573.1
KEGG: tye:THEYE_A1286 hypothetical protein.
  
     0.694
AEH23215.1
Hypothetical protein; KEGG: tye:THEYE_A1058 cytochrome c family protein, putative.
  
     0.658
AEH22949.1
tonB-system energizer ExbB; KEGG: hth:HTH_1678 biopolymer transport protein; TIGRFAM: TonB-system energizer ExbB type-2; PFAM: MotA/TolQ/ExbB proton channel.
       0.590
AEH22950.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hth:HTH_1677 biopolymer transport protein.
       0.590
AEH22951.1
KEGG: hth:HTH_0241 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein.
       0.590
AEH23570.1
PFAM: Cytochrome c, class III; KEGG: tye:THEYE_A1283 high-molecular-weight cytochrome c.
  
     0.575
AEH22560.1
KEGG: dte:Dester_0979 hypothetical protein.
  
     0.572
AEH22423.1
KEGG: dte:Dester_1082 hypothetical protein.
  
     0.552
AEH22751.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
     0.506
AEH23217.1
PFAM: Cytochrome c, class III; KEGG: tye:THEYE_A1056 cytochrome c3 chain A.
  
     0.504
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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