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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22963.1KEGG: abi:Aboo_1036 hypothetical protein. (777 aa)    
Predicted Functional Partners:
AEH22962.1
PFAM: Metallophosphoesterase; KEGG: abi:Aboo_1037 metallophosphoesterase.
 
   0.945
AEH22960.1
PFAM: Protein of unknown function DUF1284; KEGG: tye:THEYE_A0527 hypothetical protein.
       0.773
AEH22961.1
PFAM: Protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: tye:THEYE_A1162 hypothetical protein.
       0.773
AEH22964.1
Hypothetical protein; KEGG: cts:Ctha_0439 TPR repeat-containing protein.
       0.548
AEH22959.1
TIGRFAM: HDIG; PFAM: Metal-dependent hydrolase HDOD; KEGG: gsu:GSU2063 HD domain-containing protein; SMART: Metal-dependent phosphohydrolase, HD region.
       0.514
AEH22954.1
PFAM: Flavin reductase-like, FMN-binding; KEGG: pai:PAE2058 hypothetical protein.
 
     0.444
AEH22956.1
KEGG: sto:ST1739 hypothetical protein.
       0.431
AEH22957.1
PFAM: ATP dependent DNA ligase, central; KEGG: tbo:Thebr_0487 DNA polymerase LigD, ligase domain-containing protein.
       0.431
AEH22958.1
KEGG: tye:THEYE_A0630 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
       0.431
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
       0.420
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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