close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22969.1KEGG: pmx:PERMA_1111 transglutaminase domain protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like. (644 aa)    
Predicted Functional Partners:
AEH22968.1
Protein of unknown function DUF58; KEGG: saf:SULAZ_0020 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF58.
 
    0.959
AEH22967.1
PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: sul:SYO3AOP1_1523 ATPase associated with various cellular activities AAA_3.
 
  
 0.947
AEH22945.1
KEGG: she:Shewmr4_0422 methylation site containing protein.
  
     0.634
AEH22966.1
Hypothetical protein.
       0.553
AEH22563.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: saf:SULAZ_0401 PAS fold family protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS.
     
 0.501
AEH22838.1
PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; Glutaredoxin; KEGG: hth:HTH_1351 thiol:disulfide interchange protein.
 
     0.476
AEH23297.1
KEGG: dpr:Despr_3219 fimbrial assembly protein PilO.
  
     0.459
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.