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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22971.1PFAM: Bacterial extracellular solute-binding, family 1; KEGG: apo:Arcpr_0800 molybdenum ABC transporter, periplasmic molybdate-binding protein. (277 aa)    
Predicted Functional Partners:
AEH23029.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mpd:MCP_1862 ABC transporter permease protein.
 
 
 0.809
AEH22970.1
KEGG: mmb:Mmol_0710 peptidase M48 Ste24p; PFAM: Peptidase M48, Ste24p; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF.
       0.773
AEH22560.1
KEGG: dte:Dester_0979 hypothetical protein.
  
     0.736
AEH22423.1
KEGG: dte:Dester_1082 hypothetical protein.
  
     0.680
AEH23700.1
KEGG: hth:HTH_0612 hypothetical protein.
 
     0.634
AEH23573.1
KEGG: tye:THEYE_A1286 hypothetical protein.
  
     0.581
trmJ
RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
       0.541
AEH23572.1
KEGG: tye:THEYE_A1285 hypothetical protein.
 
     0.540
AEH22602.1
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
  
  
 0.521
AEH22952.1
PFAM: Protein of unknown function, CGGC domain; KEGG: tye:THEYE_A1863 hypothetical protein.
  
     0.483
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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