Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH22979.1Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: tmt:Tmath_1299 Mg chelatase, subunit ChlI; SMART: ATPase, AAA+ type, core. (510 aa)    
Predicted Functional Partners:
AEH23090.1
DNA protecting protein DprA; KEGG: tte:TTE1450 DNA uptake Rossmann fold nucleotide-binding protein; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A.
 
 0.805
AEH22981.1
KEGG: hth:HTH_1813 hydrogenase assembly chaperone; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC.
   
   0.796
AEH22980.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: atm:ANT_09900 putative phosphatidylinositol synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.793
AEH22982.1
KEGG: hth:HTH_1814 hydrogenase expression/formation protein; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein.
       0.779
AEH22415.1
PFAM: Phosphoribosyltransferase; KEGG: cdl:CDR20291_0132 putative phosphoribosyl transferase.
 
  
 0.771
AEH23078.1
UPF0102 protein yraN; KEGG: dtu:Dtur_1530 hypothetical protein; HAMAP: Uncharacterised protein family UPF0102; PFAM: Uncharacterised protein family UPF0102; Belongs to the UPF0102 family.
 
    0.694
AEH23620.1
KEGG: sep:SE1274 ComEC late competence protein 3; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
 
  
 0.646
atpE
ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
       0.553
atpB
ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
       0.415
AEH22679.1
Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.408
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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