STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22989.1PFAM: Formylmethanofuran dehydrogenase, subunit E region; KEGG: sun:SUN_1417 hypothetical protein. (242 aa)    
Predicted Functional Partners:
AEH22502.1
KEGG: adg:Adeg_0335 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane.
  
  
  0.926
AEH22599.1
Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase Fe4S4 region; Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; manually curated; KEGG: tye:THEYE_A0891 formate dehydrogenase, alpha subunit, selenocysteine-containing; TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; Twin-arginine translocation pathway, signal sequence; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.907
AEH23528.1
TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; Twin-arginine translocation pathway, signal sequence; KEGG: tye:THEYE_A0891 formate dehydrogenase, alpha subunit, selenocysteine-containing; PFAM: Molybdopterin oxidoreductase Fe4S4 region; Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.907
AEH22600.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tye:THEYE_A0893 nitrate-inducible formate dehydrogenase, beta subunit.
     
  0.900
AEH23529.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tye:THEYE_A0893 nitrate-inducible formate dehydrogenase, beta subunit.
     
  0.900
AEH23568.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: tye:THEYE_A1281 iron-sulfur protein.
     
  0.900
AEH22990.1
PFAM: Protein of unknown function DUF81; KEGG: rrs:RoseRS_2089 hypothetical protein.
       0.773
AEH22988.1
TIGRFAM: Redox-active disulphide protein 2; KEGG: apo:Arcpr_0666 redox-active disulfide protein 2.
 
     0.741
AEH22987.1
PFAM: Protein of unknown function DUF318, transmembrane; KEGG: afu:AF2247 hypothetical protein.
 
    0.683
AEH22986.1
Regulatory protein ArsR; KEGG: tye:THEYE_A0200 heavy metal resistance transcription regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
 
     0.679
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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