Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH23020.1PFAM: Type II/III secretion system; KEGG: pmx:PERMA_0972 putative pilus; Belongs to the bacterial secretin family. (483 aa)    
Predicted Functional Partners:
AEH23014.1
PFAM: Type II secretion system F domain; KEGG: pmx:PERMA_0978 putative type II secretion system protein.
 
  
 0.833
AEH23021.1
KEGG: pmx:PERMA_0971 tetratricopeptide repeat domain protein; PFAM: Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat.
  
  
 0.831
AEH23013.1
PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: pmx:PERMA_0977 type IV pilus assembly protein TapB.
 
  
 0.793
AEH23016.1
SMART: ATPase, AAA+ type, core; KEGG: pmx:PERMA_0968 peptidoglycan-binding domain 1 protein.
 
  
 0.773
AEH23022.1
Hypothetical protein; KEGG: tye:THEYE_A1502 putative hemagglutinin-related protein.
 
  
 0.750
AEH23023.1
KEGG: dte:Dester_1442 N-methylation domain-containing protein.
 
  
 0.664
AEH23019.1
Hypothetical protein.
       0.576
AEH23017.1
Hypothetical protein.
       0.575
AEH23018.1
Hypothetical protein.
       0.561
AEH23015.1
Hypothetical protein.
       0.530
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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