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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23027.1Sigma 54 interacting domain protein; May be involved in recombinational repair of damaged DNA. (546 aa)    
Predicted Functional Partners:
AEH23026.1
KEGG: dth:DICTH_1386 tRNA methyl transferase.
       0.816
AEH23024.1
UDP-N-acetylmuramate--L-alanine ligase; KEGG: dps:DP2930 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diamino pimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal.
 
    0.815
AEH23025.1
PFAM: Protein of unknown function DUF62; KEGG: gvi:glr2922 hypothetical protein.
       0.811
recA
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.766
AEH23022.1
Hypothetical protein; KEGG: tye:THEYE_A1502 putative hemagglutinin-related protein.
       0.718
AEH23023.1
KEGG: dte:Dester_1442 N-methylation domain-containing protein.
       0.718
AEH22708.1
KEGG: dak:DaAHT2_1904 competence/damage-inducible protein CinA; TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: CinA, C-terminal; Molybdopterin binding; Belongs to the CinA family.
 
   
 0.583
AEH23028.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: mka:MK1523 ABC-type molibdate transport systems, ATPase component; SMART: ATPase, AAA+ type, core.
       0.550
AEH23029.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mpd:MCP_1862 ABC transporter permease protein.
       0.550
AEH23030.1
KEGG: mka:MK1521 ABC-type molybdate transport system, periplasmic component; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1.
       0.550
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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