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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23055.1Protein of unknown function UPF0153; PFAM: Uncharacterised protein family UPF0153; KEGG: dal:Dalk_2850 hypothetical protein. (238 aa)    
Predicted Functional Partners:
AEH23051.1
KEGG: dte:Dester_1082 hypothetical protein.
 
     0.879
hslO
33 kDa chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.
 
     0.811
pyrD
Dihydroorotate dehydrogenase family protein; Catalyzes the conversion of dihydroorotate to orotate.
       0.783
AEH23054.1
PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: tye:THEYE_A0542 dihydroorotate dehydrogenase electron transfer subunit.
       0.783
AEH23554.1
Hypothetical protein.
  
     0.734
AEH23609.1
KEGG: sfu:Sfum_3774 membrane protein-like.
  
     0.722
AEH23079.1
KEGG: sfu:Sfum_0165 hypothetical protein.
  
     0.707
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.696
AEH22134.1
PFAM: Permease YjgP/YjgQ, predicted; KEGG: nis:NIS_0386 hypothetical protein.
  
     0.680
AEH22947.1
Hypothetical protein; KEGG: sat:SYN_01357 putative cytoplasmic protein.
  
     0.674
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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