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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23096.1PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bcd:BARCL_0291 hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. (376 aa)    
Predicted Functional Partners:
AEH23318.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: cbh:CLC_3009 NAD-binding Rossmann fold family oxidoreductase.
 
 
 0.980
AEH22145.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; KEGG: dak:DaAHT2_0812 oxidoreductase domain protein.
 
  
 0.805
AEH23097.1
PFAM: Xylose isomerase, TIM barrel domain; KEGG: tye:THEYE_A1274 AP endonuclease, family 2.
       0.782
AEH23098.1
PFAM: Lytic transglycosylase-like, catalytic; KEGG: dpr:Despr_0882 lytic transglycosylase catalytic.
       0.773
AEH22461.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: dte:Dester_1373 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.666
AEH23099.1
ABC-type metal ion transporter, periplasmic subunit; PFAM: ABC transporter metal-binding lipoprotein; KEGG: aae:aq_619 adhesion B precursor.
       0.613
secF
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
       0.605
AEH23484.1
PFAM: Nucleotidyl transferase; KEGG: dak:DaAHT2_0857 nucleotidyl transferase.
  
  
 0.579
AEH23095.1
PFAM: Glycosyl transferase, family 9; KEGG: hth:HTH_1721 glycosyltransferase.
     
 0.558
AEH22433.1
TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: dte:Dester_1366 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.548
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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