Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEH23108.1TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: sfu:Sfum_3063 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF; Belongs to the peptidase S41A family. (413 aa)    
Predicted Functional Partners:
AEH23430.1
PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: sat:SYN_00192 TPR repeat-containing protein.
 
 
 0.931
AEH23107.1
PFAM: Peptidase M50; KEGG: dps:DP0062 hypothetical protein.
     
 0.795
AEH22308.1
NLP/P60 protein; KEGG: tye:THEYE_A1300 probable endopeptidase LytE; PFAM: NLP/P60; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup.
  
 
 0.767
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
       0.613
AEH23106.1
PFAM: Protein of unknown function DUF6, transmembrane; KEGG: toc:Toce_2211 protein of unknown function DUF6 transmembrane.
       0.610
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
     
 0.577
AEH22532.1
KEGG: din:Selin_2214 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup.
  
  
 0.529
AEH23021.1
KEGG: pmx:PERMA_0971 tetratricopeptide repeat domain protein; PFAM: Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat.
   
 
 0.501
AEH23637.1
PFAM: Tetratricopeptide TPR-1; KEGG: ddf:DEFDS_1481 hypothetical protein.
   
 
 0.501
AEH23113.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
    0.465
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.