STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23145.1Hypothetical protein. (364 aa)    
Predicted Functional Partners:
AEH23144.1
AAA ATPase central domain protein; KEGG: cac:CA_C0602 ATP-dependent zinc metallopeptidase FtsH (cell dividion protein); PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core.
       0.773
AEH23146.1
Hypothetical protein.
       0.773
AEH23147.1
Hypothetical protein.
       0.584
AEH23148.1
KEGG: tpt:Tpet_1768 hypothetical protein.
       0.428
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.