STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23156.1PFAM: UspA; KEGG: tye:THEYE_A1200 universal stress protein, putative. (278 aa)    
Predicted Functional Partners:
AEH23155.1
PFAM: Sodium/calcium exchanger membrane region; KEGG: tye:THEYE_A0130 Ca2+/Na+ antiporter.
 
     0.847
AEH23157.1
KEGG: tam:Theam_1607 ATPase with chaperone activity, ATP-binding subunit.
 
     0.820
AEH23154.1
FolC bifunctional protein; TIGRFAM: Folylpolyglutamate synthetase; KEGG: kol:Kole_1736 FolC bifunctional protein; PFAM: Mur ligase, central; Belongs to the folylpolyglutamate synthase family.
       0.783
AEH23162.1
PFAM: Outer membrane efflux protein; KEGG: tye:THEYE_A0119 outer membrane efflux protein.
 
     0.738
AEH23425.1
PFAM: Methyltransferase type 12; KEGG: tye:THEYE_A2047 hypothetical protein.
  
     0.723
AEH22362.1
PFAM: UspA; KEGG: sfu:Sfum_0646 UspA domain-containing protein.
  
     0.700
AEH23615.1
PFAM: Type IV pilus assembly PilZ; KEGG: tye:THEYE_A0814 type IV pilus assembly protein PilZ.
  
     0.662
AEH23161.1
KEGG: tam:Theam_1131 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.647
AEH23424.1
KEGG: tye:THEYE_A1972 hypothetical protein.
  
     0.621
AEH22616.1
PFAM: Glycosyl transferase, family 39; KEGG: dte:Dester_0129 glycosyl transferase family 39.
  
     0.612
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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