Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH23157.1KEGG: tam:Theam_1607 ATPase with chaperone activity, ATP-binding subunit. (168 aa)    
Predicted Functional Partners:
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
   
 
 0.832
AEH23156.1
PFAM: UspA; KEGG: tye:THEYE_A1200 universal stress protein, putative.
 
     0.816
rplW
Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.791
AEH23154.1
FolC bifunctional protein; TIGRFAM: Folylpolyglutamate synthetase; KEGG: kol:Kole_1736 FolC bifunctional protein; PFAM: Mur ligase, central; Belongs to the folylpolyglutamate synthase family.
       0.779
AEH23155.1
PFAM: Sodium/calcium exchanger membrane region; KEGG: tye:THEYE_A0130 Ca2+/Na+ antiporter.
       0.779
rplP
50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.766
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
   
 
 0.664
rplR
Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
   
 
 0.610
AEH23158.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: pmx:PERMA_1485 macrolide export ATP-binding/permease protein MacB.
       0.580
AEH23159.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: vpr:Vpar_1070 protein of unknown function DUF214.
       0.580
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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