STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23160.1Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: cbf:CLI_0142 putative macrolide efflux ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core. (225 aa)    
Predicted Functional Partners:
AEH23158.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: pmx:PERMA_1485 macrolide export ATP-binding/permease protein MacB.
 
 0.998
AEH23159.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: vpr:Vpar_1070 protein of unknown function DUF214.
 
 0.997
AEH23161.1
KEGG: tam:Theam_1131 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.948
AEH23653.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: tye:THEYE_A1232 ABC transporter, permease protein.
  
 
 0.917
dnaA
Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
      0.899
AEH23162.1
PFAM: Outer membrane efflux protein; KEGG: tye:THEYE_A0119 outer membrane efflux protein.
 
 
 0.886
AEH22341.1
KEGG: sku:Sulku_2655 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.716
AEH23254.1
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: ddf:DEFDS_0328 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
   
0.703
AEH22786.1
PFAM: Outer membrane lipoprotein carrier protein LolA; KEGG: sat:SYN_00884 outer membrane lipoprotein carrier protein.
   
 
 0.693
AEH23154.1
FolC bifunctional protein; TIGRFAM: Folylpolyglutamate synthetase; KEGG: kol:Kole_1736 FolC bifunctional protein; PFAM: Mur ligase, central; Belongs to the folylpolyglutamate synthase family.
     
 0.610
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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