Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH23163.1PFAM: Amino acid permease-associated region; KEGG: saf:SULAZ_1269 amino acid permease-associated region. (461 aa)    
Predicted Functional Partners:
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
   
   0.759
AEH23164.1
KEGG: tvo:TVN0065 MarC family integral membrane protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related.
       0.732
AEH23165.1
KEGG: tye:THEYE_A0587 hypothetical protein.
  
    0.730
AEH23167.1
PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: dth:DICTH_1086 MgpA protein.
       0.727
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
       0.727
AEH23169.1
PFAM: Protein of unknown function DUF503; KEGG: dae:Dtox_3603 hypothetical protein.
       0.727
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
       0.727
AEH23160.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: cbf:CLI_0142 putative macrolide efflux ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core.
     
 0.585
AEH23161.1
KEGG: tam:Theam_1131 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.584
AEH23158.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: pmx:PERMA_1485 macrolide export ATP-binding/permease protein MacB.
       0.581
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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