STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23195.1Hypothetical protein. (277 aa)    
Predicted Functional Partners:
AEH23196.1
KEGG: tal:Thal_0004 hypothetical protein.
       0.773
AEH23194.1
KEGG: tal:Thal_0002 hypothetical protein.
       0.625
AEH23197.1
TIGRFAM: CRISPR-associated protein Csm1; KEGG: saf:SULAZ_1602 crispr-associated protein, Csm1 family.
       0.610
AEH23193.1
Hypothetical protein.
       0.609
AEH23198.1
KEGG: mru:mru_1182 CRISPR-associated protein Csm2 family; TIGRFAM: CRISPR-associated protein, TM1810 C-terminal; PFAM: CRISPR-associated protein, TM1810 C-terminal.
       0.566
AEH23199.1
KEGG: saf:SULAZ_1604 crispr-associated RAMP protein, Csm3 family; TIGRFAM: CRISPR-associated RAMP Csm3; PFAM: Protein of unknown function DUF324.
       0.475
AEH23200.1
KEGG: saf:SULAZ_1605 crispr-associated RAMP protein, Csm4 family; TIGRFAM: Protein of unknown function DUF314; PFAM: Protein of unknown function DUF324.
       0.448
AEH23201.1
KEGG: saf:SULAZ_1607 crispr-associated RAMP protein, Csm5 family; TIGRFAM: CRISPR-associated protein, TM1807; PFAM: Protein of unknown function DUF324.
       0.438
AEH23202.1
PFAM: Protein of unknown function DUF2276; KEGG: tam:Theam_0867 CRISPR-associated protein Cas6.
       0.438
AEH23203.1
KEGG: toc:Toce_0530 CRISPR-associated protein, MJ1666 family; TIGRFAM: CRISPR-associated protein, MJ1666; PFAM: CRISPR-associated protein DxTHG.
       0.438
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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