Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH23247.1PFAM: DNA methylase N-4/N-6; KEGG: sul:SYO3AOP1_0022 DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family. (414 aa)    
Predicted Functional Partners:
AEH23248.1
KEGG: sul:SYO3AOP1_0021 conserved hypothetical cytosolic protein.
 
     0.947
AEH23246.1
ABC transporter related protein; KEGG: det:DET0815 FeS assembly ATPase SufC, putative; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
       0.502
hisC
PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: dal:Dalk_0935 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.465
AEH23245.1
SufBD protein; PFAM: SUF system FeS cluster assembly, SufBD; KEGG: deb:DehaBAV1_0736 SufBD protein.
       0.465
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
       0.418
AEH23250.1
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.418
AEH23251.1
Ribonuclease, Rne/Rng family; KEGG: cni:Calni_1377 RNase G; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain.
       0.418
AEH23252.1
TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; KEGG: dpr:Despr_1621 histidinol-phosphate phosphatase family protein; PFAM: Haloacid dehalogenase-like hydrolase.
       0.413
AEH23253.1
KEGG: tye:THEYE_A0945 lipopolysaccharide heptosyltransferase II; TIGRFAM: Lipopolysaccharide heptosyltransferase I; Lipopolysaccharide heptosyltransferase II; PFAM: Glycosyl transferase, family 9.
       0.413
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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