Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH23259.1UPF0296 protein; KEGG: drt:Dret_0295 hypothetical protein; HAMAP: UPF0296 protein; PFAM: Protein of unknown function DUF370; Belongs to the RemA family. (93 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
    0.964
AEH23261.1
KEGG: tte:TTE2313 rRNA methylase; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.813
AEH22335.1
KEGG: fma:FMG_0655 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732.
 
    0.690
AEH23257.1
TIGRFAM: Phosphatidylserine decarboxylase-related protein; KEGG: dps:DP2771 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related.
       0.486
AEH23258.1
KEGG: sfu:Sfum_3028 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.486
AEH23442.1
PFAM: Protein of unknown function DUF342; KEGG: aar:Acear_1616 hypothetical protein.
 
     0.457
AEH23256.1
PFAM: Ferredoxin; KEGG: dak:DaAHT2_1982 ferredoxin.
       0.436
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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