STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23295.1KEGG: gem:GM21_1506 hypothetical protein. (493 aa)    
Predicted Functional Partners:
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.763
AEH23387.1
KEGG: pca:Pcar_3121 hypothetical protein.
  
     0.756
AEH23609.1
KEGG: sfu:Sfum_3774 membrane protein-like.
  
     0.747
AEH23512.1
KEGG: dbr:Deba_1413 hypothetical protein.
  
     0.700
AEH23299.1
PFAM: Type II/III secretion system; NolW-like; Secretin/TonB, short N-terminal; KEGG: lpa:lpa_01404 type IV pilus assembly protein PilQ.
 
  
 0.699
AEH22616.1
PFAM: Glycosyl transferase, family 39; KEGG: dte:Dester_0129 glycosyl transferase family 39.
  
    0.695
AEH22134.1
PFAM: Permease YjgP/YjgQ, predicted; KEGG: nis:NIS_0386 hypothetical protein.
  
     0.677
AEH22822.1
PFAM: Colicin V production protein; KEGG: chl:Chy400_1054 colicin V production protein.
 
    0.666
AEH23079.1
KEGG: sfu:Sfum_0165 hypothetical protein.
  
     0.648
AEH23137.1
PFAM: DNA polymerase III, delta; KEGG: ssp:SSP1171 DNA polymerase III subunit delta.
  
     0.642
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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