Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH23314.1KEGG: sta:STHERM_c17460 HEPN domain-containing protein; PFAM: HEPN; SMART: HEPN. (136 aa)    
Predicted Functional Partners:
AEH23315.1
PFAM: Nucleotidyltransferase; KEGG: fpl:Ferp_1558 DNA polymerase beta domain protein region.
 
 
   0.949
AEH23176.1
PFAM: Nucleotidyltransferase; KEGG: tmt:Tmath_0293 DNA polymerase beta domain protein region.
 
     0.688
AEH23316.1
KEGG: mja:MJ_0718 chromate resistance protein ChrA; TIGRFAM: Chromate transporter; PFAM: Chromate transporter region.
       0.615
AEH23317.1
Hypothetical protein; KEGG: pca:Pcar_1273 glycosyltransferase.
       0.449
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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