STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23317.1Hypothetical protein; KEGG: pca:Pcar_1273 glycosyltransferase. (457 aa)    
Predicted Functional Partners:
AEH22891.1
PFAM: Glycosyl transferase, family 39; KEGG: hth:HTH_0673 glycosyltransferase, family 39.
  
     0.706
AEH22560.1
KEGG: dte:Dester_0979 hypothetical protein.
  
     0.631
AEH23051.1
KEGG: dte:Dester_1082 hypothetical protein.
  
     0.573
AEH23318.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: cbh:CLC_3009 NAD-binding Rossmann fold family oxidoreductase.
  
    0.557
AEH22123.1
Pilin; KEGG: aae:aq_1434 pilin.
 
     0.553
AEH23316.1
KEGG: mja:MJ_0718 chromate resistance protein ChrA; TIGRFAM: Chromate transporter; PFAM: Chromate transporter region.
       0.553
AEH23319.1
Glutamine--scyllo-inositol transaminase; KEGG: tsi:TSIB_2051 pyridoxal phosphate-dependent protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.538
AEH22423.1
KEGG: dte:Dester_1082 hypothetical protein.
  
     0.532
AEH23071.1
Hypothetical protein; KEGG: pfo:Pfl01_2836 glycosyl transferase family protein.
  
     0.529
AEH23554.1
Hypothetical protein.
  
     0.488
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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