Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEH23323.1KEGG: tye:THEYE_A1507 hypothetical protein. (365 aa)    
Predicted Functional Partners:
AEH23322.1
PFAM: SirA-like; KEGG: tye:THEYE_A1506 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.949
AEH23321.1
KEGG: tye:THEYE_A1505 hypothetical protein.
 
    0.937
AEH23320.1
PFAM: Uncharacterised protein family, carbohydrate kinase-related; KEGG: tye:THEYE_A1504 hypothetical protein.
 
    0.932
AEH23094.1
Selenium metabolism protein YedF; KEGG: tye:THEYE_A0996 hypothetical protein; TIGRFAM: SirA-related, selenium metabolism; PFAM: SirA-like; Belongs to the sulfur carrier protein TusA family.
 
  
 0.512
AEH23324.1
PFAM: UspA; KEGG: tye:THEYE_A0762 universal stress protein, putative.
  
    0.483
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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