Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH23372.1ABC-type transporter, integral membrane subunit; PFAM: ABC-3; KEGG: ipo:Ilyop_2389 ABC-3 protein. (269 aa)    
Predicted Functional Partners:
AEH23371.1
ABC transporter related protein; KEGG: bce:BC4279 high-affinity zinc uptake system ATP-binding protein ZnuC; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
 0.999
AEH23099.1
ABC-type metal ion transporter, periplasmic subunit; PFAM: ABC transporter metal-binding lipoprotein; KEGG: aae:aq_619 adhesion B precursor.
 
 
 0.993
AEH23373.1
KEGG: hor:Hore_21920 hydrolase, TatD family; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related.
       0.795
AEH23370.1
KEGG: ddf:DEFDS_1789 MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core.
       0.784
leuC
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
       0.779
leuD
3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.
       0.779
AEH23376.1
KEGG: sto:ST2238 DNA-directed DNA polymerase; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like.
       0.720
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
  
    0.717
AEH23375.1
PFAM: Protein of unknown function DUF82; KEGG: aae:aq_1110 hypothetical protein.
       0.714
AEH23367.1
KEGG: hth:HTH_0476 ATP-dependent protease.
       0.539
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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