Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEH23434.1KEGG: pyo:PY04214 hypothetical protein. (282 aa)    
Predicted Functional Partners:
AEH23432.1
CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; Protein of unknown function DUF21; Transporter-associated region; KEGG: aar:Acear_0620 hypothetical protein.
       0.779
AEH23433.1
PFAM: Transporter-associated region; Cystathionine beta-synthase, core; Protein of unknown function DUF21; KEGG: ttj:TTHA0734 hemolysin-related protein.
       0.779
AEH23435.1
KEGG: dpr:Despr_0597 hypothetical protein.
       0.779
AEH23436.1
PFAM: DNA helicase, UvrD/REP type; KEGG: rmr:Rmar_0453 UvrD/REP helicase.
       0.532
AEH23437.1
Hypothetical protein.
       0.487
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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