STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH23476.1Hypothetical protein; KEGG: tye:THEYE_A1962 Uma3. (516 aa)    
Predicted Functional Partners:
AEH22586.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; Trehalose-phosphatase; KEGG: hth:HTH_0762 trehalose-6-phosphate synthase; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase.
   
    0.945
AEH23619.1
Protein of unknown function DUF101; PFAM: Archease, tRNA m5C methyltransferase chaperone; KEGG: pfu:PF1552 hypothetical protein.
   
    0.937
AEH23477.1
KEGG: cli:Clim_0865 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein.
       0.637
groS
10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
       0.623
AEH23080.1
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
    0.608
groL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
       0.571
AEH23466.1
KEGG: dak:DaAHT2_2096 pyruvate phosphate dikinase PEP/pyruvate-binding protein; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region.
 
     0.525
AEH23484.1
PFAM: Nucleotidyl transferase; KEGG: dak:DaAHT2_0857 nucleotidyl transferase.
     
 0.515
AEH23121.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: tye:THEYE_A0525 sodium/potassium-transporting ATPase, alpha subunit; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal.
 
    0.511
AEH23561.1
TIGRFAM: ATPase, P-type, magnesium-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: sul:SYO3AOP1_0795 magnesium-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal.
 
    0.492
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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